STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK71059.1Conserved hypothetical protein. (38 aa)    
Predicted Functional Partners:
ugpC
ABC transporter, nucleotide binding/ATPase protein, sn-Glycerol-3-phosphate; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
       0.542
ABK75809.1
Conserved hypothetical protein.
  
 
 0.500
ABK73222.1
Conserved hypothetical protein.
  
 
 0.500
ABK70530.1
Conserved hypothetical protein.
  
 
 0.500
ABK76077.1
Conserved hypothetical protein.
  
 
 0.500
ABK75211.1
Conserved hypothetical protein.
   
 0.466
mspB
Porin; A backup porin induced when MspA, the major porin, is deleted. Probably forms a water-filled channel which favors the permeation of cations. There are about 2400 porins in wild-type, 800 in an mspA deletion and 150 in a double mspA-mspC deletion. A triple mspA- mspC-mspD deletion mutant has low but detectable channel activity. Different conductance values with maxima at 2.3 and 4.6 nanosiemens might be caused by a simultaneous reconstitution of MspB channels into the membrane or by the existence of different MspB conformations. Belongs to the mycobacterial porin (TC 1.B.24) family.
       0.465
ABK75191.1
Probable sugar transporter sugar binding lipoprotein; Identified by match to protein family HMM PF01547.
  
    0.463
ABK74128.1
Sugar transport system; Identified by match to protein family HMM PF00528.
  
    0.460
ABK74214.1
Sugar binding-protein dependent transporter system permease; Identified by match to protein family HMM PF00528.
       0.455
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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