STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71316.1Probable serine/threonine-protein kinase PknK; Identified by match to protein family HMM PF00069; match to protein family HMM PF07721. (1148 aa)    
Predicted Functional Partners:
ABK71446.1
Stas domain, putative; Identified by match to protein family HMM PF01740.
   
  
 0.832
ABK73440.1
Carboxylate-amine ligase Nfa27300; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
   
  
 0.819
ABK75945.1
Identified by match to protein family HMM PF00481.
 
 
 0.777
ABK72306.1
Protein phosphatase 2C; Identified by match to protein family HMM PF00481.
 
 
 0.741
ABK71679.1
Fatty acid desaturase; Identified by match to protein family HMM PF03405.
  
  
 0.610
ABK70564.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
  
  
 0.543
ABK74109.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.
  
 
 0.537
garA
Forkhead-associated protein; Involved in regulation of glutamate metabolism. Acts as a phosphorylation-dependent molecular switch that modulates the activities of Kgd and Gdh.
 
 
 0.531
pknB
Serine-threonine protein kinase; Protein kinase that regulates many aspects of mycobacterial physiology. Is a key component of a signal transduction pathway that regulates cell growth, cell shape and cell division via phosphorylation of target proteins (By similarity). Probably phosphorylates RseA.
 
 
0.522
ABK75702.1
Thiocyanate hydrolase beta subunit.
 
    0.453
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.