STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK71465.1ABC nitrate/sulfonate/bicarbonate transporter, ATPase subunit; Identified by match to protein family HMM PF00005. (260 aa)    
Predicted Functional Partners:
ABK71685.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.995
ABK71607.1
Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528.
 
 0.987
ABK72495.1
Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728.
 
 0.982
ABK71895.1
Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528.
 
 0.977
ABK74762.1
ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528.
 
 0.947
ABK69573.1
Sulfonate binding protein; Identified by match to protein family HMM TIGR01728.
 
 0.940
ABK70866.1
Hypothetical protein; Identified by Glimmer2; putative.
 
 0.933
ABK74289.1
Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528.
 
 0.876
ABK73605.1
NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358.
  
 
 0.869
ABK70140.1
ABC transporter substrate-binding protein.
 
 0.859
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.