Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK74414.1Flavoprotein involved in K+ transport; Identified by match to protein family HMM PF07992. (423 aa)    
Predicted Functional Partners:
ABK69987.1
Conserved hypothetical protein.
 
  
 0.991
ABK70770.1
Selenophosphate synthetase; Identified by match to protein family HMM PF00583; match to protein family HMM PF02769.
 
  
 0.990
ABK69577.1
Putative glycosyl transferases group 1; Identified by match to protein family HMM PF00534.
 
 
 0.987
ABK70485.1
Aliphatic amidase; Identified by match to protein family HMM PF00795.
 
 
 0.984
ABK74129.1
Identified by match to protein family HMM PF00795.
 
 
 0.984
ABK75524.1
Conserved hypothetical protein.
 
    0.953
ABK71776.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
 
    0.949
ABK70993.1
Aliphatic nitrilase; Identified by match to protein family HMM PF00795.
 
 
  0.749
ABK72060.1
Xanthine/uracil permease; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916.
       0.741
ABK75987.1
Endoribonuclease L-PSP superfamily protein; Identified by match to protein family HMM PF01042.
    0.674
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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