Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72141.1Conserved hypothetical protein. (368 aa)    
Predicted Functional Partners:
ABK72706.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
   
 0.910
ABK72515.1
Identified by match to protein family HMM PF00903.
 
   
 0.886
ABK70809.1
Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
    0.863
ABK72421.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
 
   
 0.727
ABK74331.1
Conserved hypothetical protein.
  
     0.726
ABK70307.1
Putative esterase superfamily protein; Identified by match to protein family HMM PF00756.
  
   
 0.626
ABK74751.1
Conserved hypothetical protein.
  
     0.622
ABK71155.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
 
     0.616
ABK74262.1
Conserved hypothetical protein, putative; Identified by match to protein family HMM PF00657.
 
   
 0.615
ABK74136.1
Erp protein.
  
     0.610
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (30%) [HD]