STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75368.1Putative conserved exported protein. (208 aa)    
Predicted Functional Partners:
ABK73949.1
Conserved hypothetical protein.
  
     0.715
ABK70477.1
Identified by match to protein family HMM PF03734.
  
   
 0.659
ABK71683.1
PAP2 superfamily protein; Identified by match to protein family HMM PF00781; match to protein family HMM PF01569.
       0.581
ABK73105.1
Conserved hypothetical protein.
  
    0.469
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
 
     0.456
ABK73301.1
Conserved hypothetical protein.
  
     0.447
ABK75713.1
Probable cutinase; Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle.
  
     0.442
ABK70117.1
MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833.
  
     0.434
ABK69676.1
MmpL4 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833.
  
     0.429
ABK69899.1
MmpL5 protein; Identified by match to protein family HMM PF03176; match to protein family HMM TIGR00833.
  
     0.428
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.