Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK69931.1Alanine-rich protein. (113 aa)    
Predicted Functional Partners:
ABK75829.1
Integral membrane protein; Identified by match to protein family HMM PF07332.
 
  
 0.873
ABK70882.1
SseC protein; Identified by match to protein family HMM PF07210.
      
 0.824
ABK72448.1
29 kda antigen Cfp29; Identified by match to protein family HMM PF04454.
      
 0.823
ABK70772.1
Isoniazid inductible protein IniC.
  
  
 0.559
ABK75805.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin; Identified by match to protein family HMM PF00082.
 
 0.530
ABK70429.1
DNA-binding protein.
 
 0.504
eccE1
Conserved hypothetical protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Plays a role in DNA conjugation, in at least a donor strain.
  
 
   0.481
ABK71943.1
NLP/P60 family protein.
 
   
 0.470
mycP1
Membrane-anchored mycosin mycp1; May play a dual role in regulation of ESX-1 secretion and virulence. Acts as a protease that cleaves EspB. Belongs to the peptidase S8 family.
  
 0.465
ABK71297.1
Identified by match to protein family HMM PF00082.
  
 0.465
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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