STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75829.1Integral membrane protein; Identified by match to protein family HMM PF07332. (137 aa)    
Predicted Functional Partners:
ABK69931.1
Alanine-rich protein.
 
  
 0.873
ABK75216.1
Integral membrane protein.
 
    0.640
ABK71074.1
Transglycosylase associated protein.
 
  
 0.558
ABK70772.1
Isoniazid inductible protein IniC.
  
    0.537
ABK72113.1
Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
 
    0.491
ABK75774.1
Conserved hypothetical proline rich protein.
     
 0.463
ABK70953.1
Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.441
ABK75919.1
Low molecular weight protein-tyrosine-phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.441
ABK74386.1
Amidinotransferase; Identified by match to protein family HMM PF02274.
  
    0.431
ABK74867.1
Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family.
  
    0.427
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.