Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK70480.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (196 aa)    
Predicted Functional Partners:
ABK70852.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
     0.687
ABK71976.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
     
 0.587
ABK69893.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
       0.509
ABK75889.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
     0.507
ABK70913.1
TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440.
  
    0.459
ABK74051.1
Transcriptional regulatory protein; Identified by match to protein family HMM PF03551.
  
  
 0.425
ABK75097.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.418
ABK72727.1
Transcription regulator AmtR; Identified by match to protein family HMM PF00440.
  
     0.408
ABK74307.1
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
 
 
 0.404
ABK71124.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.403
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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