Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK75106.1Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. (317 aa)    
Predicted Functional Partners:
ABK73526.1
Carbon monoxide dehydrogenase F protein; Identified by match to protein family HMM PF02625.
 
   
 0.867
ABK69648.1
Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
  
 
 0.799
ABK75014.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05762.
 
     0.791
ABK69650.1
Xanthine dehydrogenase; Identified by match to protein family HMM PF02625.
 
   
 0.787
ABK74585.1
Transcriptional regulator, LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
  
    0.760
ABK75689.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
 
 0.750
ABK75039.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
  
 
 0.742
ABK70735.1
Transcriptional regulator; Identified by match to protein family HMM PF00440.
  
 
 0.715
ABK75483.1
Carbon monoxide dehydrogenase medium chain; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450.
 
     0.710
ABK70147.1
Carbon-monoxide dehydrogenase, large subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02416.
 
    0.708
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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