Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK70147.1Carbon-monoxide dehydrogenase, large subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02416. (799 aa)    
Predicted Functional Partners:
ABK71192.1
[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.
 0.999
ABK75483.1
Carbon monoxide dehydrogenase medium chain; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450.
 
 0.997
ABK73876.1
[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.
 0.990
ABK73218.1
Carbon monoxide dehydrogenase subunit G (CoxG) family protein; Identified by match to protein family HMM PF06240.
 
 
 0.987
ABK73128.1
[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.
 0.961
ABK73526.1
Carbon monoxide dehydrogenase F protein; Identified by match to protein family HMM PF02625.
 
 
 0.957
ABK75014.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05762.
 
   
 0.937
ABK70053.1
[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.
 0.930
ABK70293.1
ATPase associated with various cellular activities, AAA_5; Identified by match to protein family HMM PF00004; match to protein family HMM PF07726; match to protein family HMM PF07728.
 
  
 0.921
ABK75536.1
Nicotine dehydrogenase chain A; Identified by match to protein family HMM PF00941.
 
 0.920
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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