STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK71984.1Conserved domain protein. (64 aa)    
Predicted Functional Partners:
ABK73820.1
Cytochrome P450 FAS1; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family.
 
  
 0.841
ABK76139.1
Pyruvate synthase; Identified by match to protein family HMM PF01855.
 
  
 0.663
ABK75977.1
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
       0.637
ABK75061.1
Antibiotic transporter; Identified by match to protein family HMM PF03176.
       0.623
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.578
ABK70730.1
Transketolase, central region; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780.
 
  
  0.556
ABK74694.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
     0.545
ABK71197.1
ATPase.
  
   
 0.481
ABK73625.1
Conserved hypothetical protein.
  
     0.459
ABK75714.1
Zinc finger, UBP-type.
       0.449
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.