Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK71920.1Conserved hypothetical protein. (136 aa)    
Predicted Functional Partners:
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 
 
 0.929
ABK69579.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.841
ABK72256.1
GCN5-related N-acetyltransferase; Identified by match to protein family HMM PF00583.
     
 0.825
ABK69631.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.812
purT
Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate. Belongs to the PurK/PurT family.
       0.800
ABK70285.1
Phosphoglycerate mutase, putative.
     
 0.766
ABK75639.1
Identified by match to protein family HMM PF00300.
     
 0.766
ABK73229.1
Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family.
     
 0.766
ABK73941.1
Phosphoglycerate mutase; Identified by match to protein family HMM PF00300.
     
 0.765
ABK69697.1
Isochorismate synthase DhbC; Identified by match to protein family HMM PF00425; match to protein family HMM TIGR00543.
      
 0.735
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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