Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70099.1 | ABK70243.1 | MSMEG_3225 | MSMEG_6459 | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | 0.999 |
ABK70099.1 | ABK70598.1 | MSMEG_3225 | MSMEG_0785 | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | Conserved hypothetical protein. | 0.459 |
ABK70243.1 | ABK70099.1 | MSMEG_6459 | MSMEG_3225 | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | 0.999 |
ABK70243.1 | ABK70598.1 | MSMEG_6459 | MSMEG_0785 | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | Conserved hypothetical protein. | 0.457 |
ABK70598.1 | ABK70099.1 | MSMEG_0785 | MSMEG_3225 | Conserved hypothetical protein. | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | 0.459 |
ABK70598.1 | ABK70243.1 | MSMEG_0785 | MSMEG_6459 | Conserved hypothetical protein. | Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898. | 0.457 |
ABK70598.1 | ABK72090.1 | MSMEG_0785 | MSMEG_0923 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.529 |
ABK70598.1 | ABK72474.1 | MSMEG_0785 | MSMEG_4249 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.443 |
ABK70598.1 | ABK72749.1 | MSMEG_0785 | MSMEG_6255 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.475 |
ABK70598.1 | ABK74749.1 | MSMEG_0785 | MSMEG_5026 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | 0.452 |
ABK70598.1 | ABK74758.1 | MSMEG_0785 | MSMEG_3683 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.501 |
ABK70598.1 | ABK75333.1 | MSMEG_0785 | MSMEG_3957 | Conserved hypothetical protein. | Conserved 13e12 repeat family protein; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720. | 0.470 |
ABK70598.1 | ABK76052.1 | MSMEG_0785 | MSMEG_6815 | Conserved hypothetical protein. | Identified by match to protein family HMM TIGR01409. | 0.470 |
ABK70598.1 | ABK76111.1 | MSMEG_0785 | MSMEG_1149 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.475 |
ABK72090.1 | ABK70598.1 | MSMEG_0923 | MSMEG_0785 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.529 |
ABK72090.1 | ABK72474.1 | MSMEG_0923 | MSMEG_4249 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.742 |
ABK72090.1 | ABK72749.1 | MSMEG_0923 | MSMEG_6255 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.755 |
ABK72090.1 | ABK74749.1 | MSMEG_0923 | MSMEG_5026 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02720. | 0.402 |
ABK72090.1 | ABK74758.1 | MSMEG_0923 | MSMEG_3683 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.743 |
ABK72090.1 | ABK75333.1 | MSMEG_0923 | MSMEG_3957 | Conserved hypothetical protein. | Conserved 13e12 repeat family protein; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720. | 0.458 |
page 1 of 3