STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70355.1Hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389. (503 aa)    
Predicted Functional Partners:
ABK70886.1
Leupeptin-inactivating enzyme 1; Identified by match to protein family HMM PF01546; match to protein family HMM PF02225; match to protein family HMM PF04389.
 
   
0.873
ABK74117.1
Conserved hypothetical protein.
   
 0.839
ABK70225.1
LpqG protein; Identified by match to protein family HMM PF04402.
      
 0.835
ABK76075.1
LprE protein.
      
 0.824
ABK73557.1
LpqJ protein.
      
 0.821
ABK73946.1
D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
      
 0.821
ABK69605.1
Possible chalcone synthase Pks10; Identified by match to protein family HMM PF00195; match to protein family HMM PF02797.
     
 0.628
ABK69772.1
Isoprenylcysteine carboxyl methyltransferase; Identified by match to protein family HMM PF04140.
       0.620
ABK73407.1
Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family.
  
 0.617
ABK75576.1
Para-nitrobenzyl esterase; Identified by match to protein family HMM PF00135; Belongs to the type-B carboxylesterase/lipase family.
  
 0.617
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.