Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK73586.1AsnC-family protein transcriptional regulator; Identified by match to protein family HMM PF01037. (349 aa)    
Predicted Functional Partners:
cobA
uroporphyrin-III C-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01469; match to protein family HMM TIGR01470.
  
 
 0.583
ABK70592.1
ATP-dependent protease La (LON) domain subfamily protein; Identified by match to protein family HMM PF02190.
       0.562
ABK70032.1
Transcriptional regulator, AsnC family protein; Identified by match to protein family HMM PF01037.
  
     0.503
ABK70730.1
Transketolase, central region; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM PF02780.
    
 0.469
ABK76139.1
Pyruvate synthase; Identified by match to protein family HMM PF01855.
    
 0.442
ABK75522.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05976.
  
     0.412
ABK70270.1
AsnC-family protein transcriptional regulator; Identified by match to protein family HMM PF01037.
  
     0.409
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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