STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70592.1ATP-dependent protease La (LON) domain subfamily protein; Identified by match to protein family HMM PF02190. (208 aa)    
Predicted Functional Partners:
ABK69677.1
Molybdopterin biosynthesis protein MoeB; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.
   
 0.639
ABK71634.1
Identified by match to protein family HMM PF00899.
   
 0.639
ABK73081.1
Antigen 34 kDa.
   
 0.628
ABK75618.1
DNA repair exonuclease; Identified by match to protein family HMM PF00149.
  
 0.624
ABK74109.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.
 
 
 0.598
ABK73586.1
AsnC-family protein transcriptional regulator; Identified by match to protein family HMM PF01037.
       0.562
ABK73517.1
Identified by match to protein family HMM PF01398.
   
 0.532
ABK69572.1
Conserved hypothetical protein.
    
 0.463
ABK75140.1
Probable conserved mce associated membrane protein.
    
 0.463
ABK70520.1
Probable conserved membrane protein.
    
 0.463
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.