STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75107.1Multiple resistance and pH regulation protein F; Identified by match to protein family HMM PF04066. (96 aa)    
Predicted Functional Partners:
ABK73923.1
NADH ubiquinone oxidoreductase subunit 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF04039.
 
 
 0.999
ABK74925.1
Multisubunit Na+/H+ antiporter, G subunit; Identified by match to protein family HMM PF03334; match to protein family HMM TIGR01300.
 
 
 0.998
ABK73763.1
Multisubunit Na+/H+ antiporter.
 
 
 0.998
ABK72987.1
NADH-ubiquinone/plastoquinone oxidoreductase chain 4l family protein; Identified by match to protein family HMM PF00420.
 
 
 0.998
ABK72030.1
NADH-ubiquinone oxidoreductase/multisubunit na+/h+ antiporter, d subunit; Identified by match to protein family HMM PF00361.
 
 
 0.997
nuoL
NADH-quinone oxidoreductase, L subunit; Identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974.
  
 
 0.812
ABK73922.1
Oxygenase.
       0.576
ABK74883.1
Conserved hypothetical protein.
 
     0.495
ABK71042.1
Conserved hypothetical protein.
  
    0.451
ABK74079.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.436
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.