STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73763.1Multisubunit Na+/H+ antiporter. (179 aa)    
Predicted Functional Partners:
ABK73923.1
NADH ubiquinone oxidoreductase subunit 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF04039.
 
 
 0.999
ABK74925.1
Multisubunit Na+/H+ antiporter, G subunit; Identified by match to protein family HMM PF03334; match to protein family HMM TIGR01300.
 
 
 0.998
ABK75107.1
Multiple resistance and pH regulation protein F; Identified by match to protein family HMM PF04066.
 
 
 0.998
ABK72030.1
NADH-ubiquinone oxidoreductase/multisubunit na+/h+ antiporter, d subunit; Identified by match to protein family HMM PF00361.
 
 
 0.998
ABK72987.1
NADH-ubiquinone/plastoquinone oxidoreductase chain 4l family protein; Identified by match to protein family HMM PF00420.
 
 
 0.998
nuoL
NADH-quinone oxidoreductase, L subunit; Identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974.
  
 
 0.861
ABK73922.1
Oxygenase.
  
    0.589
ABK74883.1
Conserved hypothetical protein.
 
     0.513
nuoI
NADH-quinone oxidoreductase, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 
 0.471
atpFH
ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity).
      
 0.438
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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