Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK74883.1Conserved hypothetical protein. (280 aa)    
Predicted Functional Partners:
ABK73922.1
Oxygenase.
       0.559
ABK72030.1
NADH-ubiquinone oxidoreductase/multisubunit na+/h+ antiporter, d subunit; Identified by match to protein family HMM PF00361.
 
   
 0.557
ABK74925.1
Multisubunit Na+/H+ antiporter, G subunit; Identified by match to protein family HMM PF03334; match to protein family HMM TIGR01300.
 
     0.528
ABK73923.1
NADH ubiquinone oxidoreductase subunit 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF04039.
 
   
 0.516
ABK73763.1
Multisubunit Na+/H+ antiporter.
 
     0.513
ABK72987.1
NADH-ubiquinone/plastoquinone oxidoreductase chain 4l family protein; Identified by match to protein family HMM PF00420.
 
     0.511
ABK75107.1
Multiple resistance and pH regulation protein F; Identified by match to protein family HMM PF04066.
 
     0.495
ABK75142.1
Cystathionine beta-synthase; Identified by match to protein family HMM PF00291; match to protein family HMM PF00571; match to protein family HMM TIGR01137.
    
  0.480
ABK74758.1
Conserved hypothetical protein.
  
     0.460
ABK75333.1
Conserved 13e12 repeat family protein; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
 
     0.454
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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