STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75802.1Citrate transporter; Identified by match to protein family HMM PF02040; match to protein family HMM PF03600. (428 aa)    
Predicted Functional Partners:
ABK70132.1
CBS domain protein; Identified by match to protein family HMM PF00571.
 
    0.963
ABK70810.1
Conserved hypothetical protein.
  
  
 0.687
ABK70647.1
DNA-binding response regulator, LuxR family protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
  
 0.568
ABK71972.1
Two-component system sensor kinase; Identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF07730.
 
     0.550
ABK73972.1
Cytochrome C biogenesis protein transmembrane region; Identified by match to protein family HMM PF02683.
  
  
 0.533
arsB
Identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832.
  
  
 0.501
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.452
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.417
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
 
    0.415
ABK75611.1
Probable conserved transmembrane protein.
  
    0.412
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.