Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK74919.1Hypothetical protein; Identified by Glimmer2; putative. (56 aa)    
Predicted Functional Partners:
ABK72521.1
Twin-arginine translocation pathway signal; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.
  
  
 0.913
ABK76221.1
Oxidoreductase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
  
  
 0.911
ABK75175.1
Putative aldehyde or xanthine dehydrogenase, molybdopterin binding subunit protein; Identified by match to protein family HMM PF00941.
     
 0.908
ABK72260.1
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.824
ABK75415.1
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.824
ABK74094.1
Conserved hypothetical protein.
      
 0.824
ABK69975.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
  
 0.543
ABK72063.1
Dihydrodipicolinate synthase; Identified by match to protein family HMM PF00701; Belongs to the DapA family.
   
   0.454
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
    
 0.435
ABK74367.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF02082; match to protein family HMM PF07702.
  
  
 0.424
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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