STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK74560.1acyl-ACP thioesterase superfamily protein; Identified by match to protein family HMM PF01643. (282 aa)    
Predicted Functional Partners:
ABK70482.1
LprC protein.
  
     0.772
ABK71593.1
LprB protein.
  
     0.770
ABK75153.1
Conserved hypothetical protein.
  
     0.763
ABK70936.1
Conserved hypothetical protein.
  
     0.763
ABK72891.1
Conserved hypothetical protein.
  
     0.761
ABK73452.1
Conserved hypothetical protein.
  
     0.761
ABK70706.1
Probable exported protein.
  
     0.755
ABK72090.1
Conserved hypothetical protein.
  
     0.754
ABK75913.1
Putative membrane protein.
  
     0.743
aftC
Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG.
  
     0.737
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.