Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK75905.1Polyphosphate kinase 2 superfamily protein; Identified by match to protein family HMM PF03976. (295 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.853
ABK75180.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
     
 0.838
ABK73339.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04286.
       0.611
ABK70196.1
Identified by match to protein family HMM PF02541.
 
  
 0.542
ABK70685.1
Conserved hypothetical protein.
       0.516
ABK73512.1
Phosphate/sulphate permease; Identified by match to protein family HMM PF01384.
  
  
 0.475
ABK69701.1
Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381.
       0.467
ABK69794.1
PLP-dependent aminotransferases; Identified by match to protein family HMM PF00155; match to protein family HMM PF01212.
 
    0.464
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.461
ABK75902.1
Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.460
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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