STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75180.1Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. (234 aa)    
Predicted Functional Partners:
ABK75905.1
Polyphosphate kinase 2 superfamily protein; Identified by match to protein family HMM PF03976.
     
 0.838
ABK74007.1
Conserved hypothetical protein.
  
     0.638
ABK73237.1
MaoC like domain protein; Identified by match to protein family HMM PF01575.
 
   
 0.618
ABK72891.1
Conserved hypothetical protein.
 
     0.603
ABK70648.1
Heparin-binding hemagglutinin.
 
     0.601
ABK73339.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04286.
  
    0.593
ABK73008.1
Conserved hypothetical protein.
  
     0.589
ABK74426.1
Conserved hypothetical protein.
  
     0.588
ABK70706.1
Probable exported protein.
  
     0.588
ABK72474.1
Conserved hypothetical protein.
  
     0.564
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.