STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK73438.1Conserved hypothetical protein. (165 aa)    
Predicted Functional Partners:
mshA
Conserved hypothetical protein; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway; Belongs to the glycosyltransferase group 1 family. MshA subfamily.
 
     0.888
ABK71558.1
ROK family protein; Identified by match to protein family HMM PF00480.
       0.831
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.780
ABK72669.1
Anion-transporting ATPase; Identified by match to protein family HMM PF02374.
  
     0.762
fadE5
acyl-coA-dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
  
     0.748
ABK71139.1
Ion-transporting ATPase; Identified by match to protein family HMM PF02374.
  
     0.705
ABK76083.1
Cyclase/dehydrase; Identified by match to protein family HMM PF03364.
  
     0.703
ABK69701.1
Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381.
 
     0.679
ABK73467.1
Cyclase/dehydrase; Identified by match to protein family HMM PF03364.
  
     0.672
ABK74816.1
Transcriptional regulatory protein, AsnC family protein; Identified by match to protein family HMM PF01037.
  
     0.642
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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