Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK75000.1Conserved hypothetical protein. (266 aa)    
Predicted Functional Partners:
ABK70464.1
Identified by match to protein family HMM PF00583.
  
     0.695
ABK76191.1
Identified by match to protein family HMM PF00355.
  
     0.669
ABK70196.1
Identified by match to protein family HMM PF02541.
       0.633
ABK72565.1
Identified by match to protein family HMM PF01261.
       0.605
ABK74426.1
Conserved hypothetical protein.
       0.604
ABK72671.1
Conserved hypothetical protein.
  
    0.592
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.583
ABK73438.1
Conserved hypothetical protein.
  
     0.559
aftC
Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG.
  
     0.548
ABK72473.1
Integral membrane protein; Identified by match to protein family HMM PF01435; match to protein family HMM PF05569.
  
     0.537
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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