Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72072.1Putative acetyltransferase; Identified by match to protein family HMM PF00583. (283 aa)    
Predicted Functional Partners:
ABK75831.1
Integral membrane transporter; Identified by match to protein family HMM PF07690.
       0.613
ABK73109.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.613
ABK70132.1
CBS domain protein; Identified by match to protein family HMM PF00571.
 
    0.498
ABK72731.1
Conserved hypothetical protein.
       0.462
ABK70275.1
Band 7 protein; Identified by match to protein family HMM PF01145.
  
    0.431
ABK74394.1
SpfH domain protein; Identified by match to protein family HMM PF01145.
  
    0.431
ABK69701.1
Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381.
 
    0.421
mpa
ATPase, AAA family protein; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis.
   
    0.415
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: medium (42%) [HD]