STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70532.1Hypothetical protein; Identified by Glimmer2; putative. (48 aa)    
Predicted Functional Partners:
ABK75792.1
Nudix hydrolase; Identified by match to protein family HMM PF00293.
       0.781
ABK73788.1
Integral membrane protein; Identified by match to protein family HMM PF02588.
  
    0.779
ABK70108.1
ABC-type molybdenum transport system, ATPase component; Identified by match to protein family HMM PF00005.
       0.776
ABK70859.1
Probable enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
       0.773
ABK73048.1
Methyltransferase, UbiE/COQ5 family protein.
       0.670
ABK73789.1
SAM-dependent methyltransferase.
       0.664
ABK76166.1
GntR-family protein transcriptional regulator; Identified by match to protein family HMM PF00155; match to protein family HMM PF00392.
       0.570
ABK73065.1
Immunogenic protein MPB64/MPT64.
       0.493
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.