Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK71419.1Conserved hypothetical protein. (107 aa)    
Predicted Functional Partners:
ABK73512.1
Phosphate/sulphate permease; Identified by match to protein family HMM PF01384.
 
     0.783
ABK71168.1
O-succinylbenzoic acid--CoA ligase; Identified by match to protein family HMM PF00501.
       0.714
ABK75900.1
Conserved hypothetical protein.
 
     0.703
ABK75703.1
Conserved hypothetical protein.
 
   
0.599
ABK73301.1
Conserved hypothetical protein.
  
     0.514
ABK73671.1
Phosphohydrolase; Identified by match to protein family HMM PF01243.
  
    0.491
ABK75153.1
Conserved hypothetical protein.
  
     0.466
ABK70936.1
Conserved hypothetical protein.
  
     0.466
ABK71992.1
Mpr protein.
  
     0.450
ABK73105.1
Conserved hypothetical protein.
  
     0.435
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.