STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72084.1Conserved hypothetical protein. (232 aa)    
Predicted Functional Partners:
mgtA
Glycosyl transferase; Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2); Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.
     
 0.626
ABK72796.1
Conserved hypothetical protein.
  
 
 0.444
ABK69958.1
Conserved membrane protein; Identified by match to protein family HMM PF05140.
 
   
 0.416
ABK74399.1
Conserved integral membrane protein; Identified by match to protein family HMM PF07884.
  
  
 0.409
ABK75772.1
Conserved hypothetical protein.
 
  
 0.408
ABK75508.1
Abortive infection protein; Identified by match to protein family HMM PF02517.
 
     0.404
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.