Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70463.1 | ABK72965.1 | MSMEG_3935 | MSMEG_1124 | Conserved hypothetical protein. | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.709 |
ABK70463.1 | ABK73325.1 | MSMEG_3935 | MSMEG_1127 | Conserved hypothetical protein. | Probable conserved transmembrane protein. | 0.574 |
ABK70463.1 | ABK73366.1 | MSMEG_3935 | MSMEG_3955 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.786 |
ABK70463.1 | ABK73981.1 | MSMEG_3935 | MSMEG_2183 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.694 |
ABK72554.1 | ABK72831.1 | MSMEG_0254 | MSMEG_1504 | Conserved hypothetical protein. | Fluoroquinolone transport system permease protein; Probable antibiotic-transport integral membrane leucine and alanine and valine rich protein abc transporter. | 0.730 |
ABK72554.1 | ABK73325.1 | MSMEG_0254 | MSMEG_1127 | Conserved hypothetical protein. | Probable conserved transmembrane protein. | 0.577 |
ABK72554.1 | ABK75242.1 | MSMEG_0254 | MSMEG_1503 | Conserved hypothetical protein. | Probable antibiotic-transport integral membrane leucine and valine rich protein abc transporter. | 0.730 |
ABK72831.1 | ABK72554.1 | MSMEG_1504 | MSMEG_0254 | Fluoroquinolone transport system permease protein; Probable antibiotic-transport integral membrane leucine and alanine and valine rich protein abc transporter. | Conserved hypothetical protein. | 0.730 |
ABK72831.1 | ABK73325.1 | MSMEG_1504 | MSMEG_1127 | Fluoroquinolone transport system permease protein; Probable antibiotic-transport integral membrane leucine and alanine and valine rich protein abc transporter. | Probable conserved transmembrane protein. | 0.674 |
ABK72831.1 | ABK75242.1 | MSMEG_1504 | MSMEG_1503 | Fluoroquinolone transport system permease protein; Probable antibiotic-transport integral membrane leucine and alanine and valine rich protein abc transporter. | Probable antibiotic-transport integral membrane leucine and valine rich protein abc transporter. | 0.998 |
ABK72831.1 | ABK76028.1 | MSMEG_1504 | MSMEG_5821 | Fluoroquinolone transport system permease protein; Probable antibiotic-transport integral membrane leucine and alanine and valine rich protein abc transporter. | Caax amino protease family protein; Identified by match to protein family HMM PF02517. | 0.667 |
ABK72965.1 | ABK70463.1 | MSMEG_1124 | MSMEG_3935 | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Conserved hypothetical protein. | 0.709 |
ABK72965.1 | ABK73325.1 | MSMEG_1124 | MSMEG_1127 | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Probable conserved transmembrane protein. | 0.798 |
ABK72965.1 | ABK73366.1 | MSMEG_1124 | MSMEG_3955 | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Conserved hypothetical protein. | 0.699 |
ABK72965.1 | ABK73981.1 | MSMEG_1124 | MSMEG_2183 | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Conserved hypothetical protein. | 0.710 |
ABK72965.1 | ABK74791.1 | MSMEG_1124 | MSMEG_1126 | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Hypothetical protein; Identified by Glimmer2; putative. | 0.681 |
ABK72965.1 | ABK75219.1 | MSMEG_1124 | MSMEG_1125 | Putative ferredoxin FdxA; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Regulatory protein, ArsR; Identified by match to protein family HMM PF01726. | 0.896 |
ABK73325.1 | ABK70463.1 | MSMEG_1127 | MSMEG_3935 | Probable conserved transmembrane protein. | Conserved hypothetical protein. | 0.574 |
ABK73325.1 | ABK72554.1 | MSMEG_1127 | MSMEG_0254 | Probable conserved transmembrane protein. | Conserved hypothetical protein. | 0.577 |
ABK73325.1 | ABK72831.1 | MSMEG_1127 | MSMEG_1504 | Probable conserved transmembrane protein. | Fluoroquinolone transport system permease protein; Probable antibiotic-transport integral membrane leucine and alanine and valine rich protein abc transporter. | 0.674 |
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