Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK72545.1FAD dependent oxidoreductase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266. (466 aa)    
Predicted Functional Partners:
ABK75999.1
Dihydrodipicolinate synthetase; Identified by match to protein family HMM PF00701; Belongs to the DapA family.
 
     0.934
ABK70715.1
Citrate-proton symporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
 
  
 0.886
ABK73181.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
 
 
 0.864
ABK71207.1
carnitinyl-CoA dehydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.859
ABK70158.1
Formyl-coenzyme A transferase; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
 
   
 0.840
ABK74601.1
Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.
 
    0.764
ABK71275.1
5-oxovalerate dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
 
  
 0.734
etfB
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012.
  
 
 0.590
ABK74962.1
Prenyltransferase, UbiA family protein; Involved in the biosynthesis of decaprenylphosphoryl arabinose (DPA) a precursor for arabinan synthesis in mycobacterial cell wall biosynthesis. Catalyzes the transfer of a 5-phosphoribosyl residue from phosphoribose diphosphate (pRpp) to decaprenyl phosphate (DP) to form decaprenylphosphoryl-5-phosphoribose (DPPR).
  
 
 0.520
etfA
Electron transfer flavoprotein, alpha subunit; Identified by similarity to SP:P38974; match to protein family HMM PF00766; match to protein family HMM PF01012.
  
 
 0.497
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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