Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK74929.1Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022. (123 aa)    
Predicted Functional Partners:
arsB
Identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832.
 
  
 0.935
ABK70953.1
Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.934
ABK73980.1
Cadmium inducible protein cadi; Identified by match to protein family HMM PF00903.
  
  
 0.791
ABK72657.1
Putative HTH-type transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
  
  
 0.661
ABK72216.1
Putative transcriptional regulatory protein; Identified by match to protein family HMM PF01022.
 
    
0.640
ABK75689.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
   
  
 0.634
ABK72979.1
Identified by match to protein family HMM PF01022.
   
  
 0.634
ABK74448.1
Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
   
  
 0.590
ABK72421.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
   
  
 0.577
ABK70589.1
Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022.
  
   
 0.497
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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