Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK71119.1Glycosidase; Identified by match to protein family HMM PF04041. (484 aa)    
Predicted Functional Partners:
ABK75422.1
Glycosyltransferase, group I.
 
    0.956
ABK73986.1
Glycosyltransferase, group I; Identified by match to protein family HMM PF00534.
 
  
 0.951
ABK71469.1
Chitin synthase; Identified by match to protein family HMM PF00535; match to protein family HMM PF03142.
      
 0.824
ABK70442.1
PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427.
      
 0.583
cbiQ
Cobalt ABC transporter, permease protein CbiQ; Identified by match to protein family HMM PF02361; match to protein family HMM TIGR02454.
      
 0.501
ABK74803.1
Alpha-mannosidase; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.
  
  
 0.474
ABK70259.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
     0.457
treS
Trehalose synthase; Catalyzes the reversible interconversion of maltose and trehalose by transglucosylation. Maltose is the preferred substrate. To a lesser extent, also displays amylase activity, catalyzing the endohydrolysis of (1->4)-alpha-D- glucosidic linkages in glycogen and maltooligosaccharides such as maltoheptaose, to produce maltose which then can be converted to trehalose. TreS plays a key role in the utilization of trehalose for the production of glycogen and alpha-glucan via the TreS-Pep2 branch involved in the biosynthesis of maltose-1-phosphate (M1P). Might also functio [...]
     
 0.429
ABK71756.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
     0.419
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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