Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABK72596.1Conserved hypothetical protein; Identified by match to protein family HMM PF01936. (289 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.572
ABK71642.1
Fatty acid desaturase; Identified by match to protein family HMM PF00487.
       0.540
ABK73158.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
 
   
 0.420
ABK74749.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02720.
  
   
 0.419
ABK74432.1
HNH endonuclease; Identified by match to protein family HMM PF01844; match to protein family HMM PF02720.
 
   
 0.418
ABK74531.1
Conserved hypothetical protein.
 
     0.415
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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