STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK70470.1Hypothetical protein; Identified by Glimmer2; putative. (105 aa)    
Predicted Functional Partners:
ABK75347.1
Conserved hypothetical protein.
 
    0.765
ABK70792.1
Conserved hypothetical protein.
 
    0.754
ABK72847.1
Conserved hypothetical protein.
 
    0.748
ABK71992.1
Mpr protein.
  
 
 0.637
ABK72168.1
Cobalt transport protein CbiM.
  
     0.547
ABK72970.1
Conserved hypothetical protein.
 
 0.504
ABK73163.1
Anti-anti-sigma factor; Identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; Belongs to the anti-sigma-factor antagonist family.
 
    0.504
ABK75143.1
Hypothetical protein; Identified by Glimmer2; putative.
  
 
 0.501
ABK69844.1
Conserved hypothetical protein.
  
 
 0.497
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.495
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.