Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
iscSCysteine desulfurase IscS; Identified by match to protein family HMM PF00266. (386 aa)    
Predicted Functional Partners:
ABK73018.1
SUF system FeS assembly protein, NifU family protein; Identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994.
  
 0.970
ABK69677.1
Molybdopterin biosynthesis protein MoeB; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.
 
 
 0.946
ABK74971.1
Putative thiosulfate sulfurtransferase; May be a sulfotransferase involved in the formation of thiosulfate.
  
 0.943
ABK74642.1
Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212.
  
 
 
0.935
ABK69803.1
Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family.
 
 
 0.916
ABK74640.1
Putative thiosulfate sulfurtransferase; Identified by match to protein family HMM PF00581.
  
 0.883
ABK73828.1
3-mercaptopyruvate sulfurtransferase; Identified by match to protein family HMM PF00581.
  
 0.883
sufC
FeS assembly ATPase SufC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978.
  
  
 0.882
fdhD
Formate dehydrogenase family protein accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
  
 0.869
sufB
FeS assembly protein SufB; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980.
  
  
 0.869
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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