Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75057.1Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. (567 aa)    
Predicted Functional Partners:
lipP
Carboxylesterase, putative; Identified by similarity to PIR:JC2091; match to protein family HMM PF00144.
     
 0.830
ABK72429.1
Conserved hypothetical protein.
      
 0.824
ABK72981.1
Identified by match to protein family HMM PF04909.
      
 0.824
ABK71957.1
Identified by match to protein family HMM PF04909.
      
 0.824
ABK75162.1
Ethyl tert-butyl ether degradation EthD; Identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118.
  
     0.713
ABK73790.1
TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721.
  
     0.684
ABK72862.1
EthD protein; Identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118.
       0.675
ABK70904.1
Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
  
    0.669
ABK72970.1
Conserved hypothetical protein.
 
     0.656
ABK70593.1
Conserved hypothetical protein.
 
   
 0.642
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.