Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK75093.1Asp/Glu racemase; Identified by match to protein family HMM PF01177. (384 aa)    
Predicted Functional Partners:
ABK75757.1
Identified by match to protein family HMM PF01522.
 
     0.860
ABK76174.1
Major facilitator superfamily protein MFS_1; Identified by match to protein family HMM PF07690.
     
 0.784
ABK70383.1
IgiC, putative; Identified by match to protein family HMM PF01177.
  
     0.767
ABK71590.1
Transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
       0.613
ABK74467.1
Decarboxylase; Identified by match to protein family HMM PF01177.
 
  
 
0.577
ABK75844.1
Conserved hypothetical protein.
  
     0.556
ABK72225.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase; Identified by match to protein family HMM PF01557.
       0.544
ABK71048.1
Identified by match to protein family HMM PF00857.
 
 
 0.426
ABK75342.1
Identified by match to protein family HMM PF03972.
 
     0.417
aspA
Aspartate ammonia-lyase; Identified by match to protein family HMM PF00206.
     
 0.410
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.