Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK74028.1Putative xylulose kinase; Identified by match to protein family HMM PF00370. (415 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02631; Belongs to the xylose isomerase family.
  
 
 0.838
ABK74417.1
Putative sugar kinase protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; Belongs to the FGGY kinase family.
 
 
 0.816
ABK70297.1
DeoR-family protein transcriptional regulator; Identified by match to protein family HMM PF00455; match to protein family HMM PF08220.
  
  
 0.794
ABK72535.1
1-phosphofructokinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family.
     
 0.793
ABK75701.1
Xylulose kinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; Belongs to the FGGY kinase family.
  
     0.721
ABK75454.1
Conserved hypothetical protein; Identified by similarity to SP:P37339; match to protein family HMM PF01266.
     
 0.712
ABK74006.1
L-ribulose-5-phosphate 4-epimerase UlaF; Identified by match to protein family HMM PF00596.
  
 
 0.678
rpe
Ribulose-phosphate 3-epimerase; Identified by similarity to SP:P46969; match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.623
ABK73984.1
Tagatose-1,6-bisphosphate aldolase GatY; Identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167.
  
  
 0.619
ABK74088.1
Transketolase; Identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780.
  
 
 0.590
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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