Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK70622.1Creatininase subfamily protein; Identified by match to protein family HMM PF02633. (222 aa)    
Predicted Functional Partners:
ABK72099.1
Probable membrane sugar transferase; Identified by match to protein family HMM PF00535.
 
  
 0.993
ABK73646.1
Conserved hypothetical protein.
 
  
 0.943
ABK73068.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
 
  
 0.911
ABK72067.1
FMN-dependent dehydrogenase; Identified by match to protein family HMM PF01070.
 
  
 0.845
ABK75310.1
Glucose-methanol-choline oxidoreductase; Identified by match to protein family HMM PF00732; match to protein family HMM PF05199.
       0.827
ABK75039.1
Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
 
  
 0.824
ABK70439.1
Cytosine deaminase; Identified by match to protein family HMM PF00383.
    
  0.668
ABK71469.1
Chitin synthase; Identified by match to protein family HMM PF00535; match to protein family HMM PF03142.
  
  
 0.478
ABK71398.1
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
  
  
 0.478
ABK72411.1
Conserved hypothetical protein.
  
  
 0.478
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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