Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK72099.1Probable membrane sugar transferase; Identified by match to protein family HMM PF00535. (470 aa)    
Predicted Functional Partners:
ABK70622.1
Creatininase subfamily protein; Identified by match to protein family HMM PF02633.
 
  
 0.993
ABK72067.1
FMN-dependent dehydrogenase; Identified by match to protein family HMM PF01070.
 
   
 0.968
ABK73646.1
Conserved hypothetical protein.
 
   
 0.946
ABK69535.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106.
 
 
 0.931
ABK70855.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.931
ABK69873.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106.
 
 
 0.927
ABK75310.1
Glucose-methanol-choline oxidoreductase; Identified by match to protein family HMM PF00732; match to protein family HMM PF05199.
  
  
 0.922
ABK73068.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
 
   
 0.912
ABK70709.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106.
 
 
 0.906
ABK70507.1
Carveol dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
 
 0.901
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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