Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK71069.1Oxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. (501 aa)    
Predicted Functional Partners:
ABK71544.1
Identified by match to protein family HMM PF00440; match to protein family HMM PF02796.
  
  
 0.785
ABK73982.1
Identified by match to protein family HMM PF03109.
  
 0.660
ABK75041.1
Methyltransferase small domain superfamily protein; Identified by match to protein family HMM PF05175; match to protein family HMM PF05724.
 
 0.637
ABK76062.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111.
  
 0.609
ABK70997.1
Identified by match to protein family HMM PF03109.
   
 0.608
mmsA
Methylmalonate-semialdehyde dehydrogenase; Identified by similarity to GB:AAA99190.1; match to protein family HMM PF00171; match to protein family HMM TIGR01722.
  
 0.601
ABK72977.1
Methyltransferase, putative, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
 
  0.591
ABK73637.1
Conserved hypothetical protein.
  
 0.588
ABK70302.1
Methyltransferase type 12; Identified by match to protein family HMM PF05724.
  
 0.588
ABK72111.1
Conserved hypothetical protein; Probable S-adenosylmethionine-dependent methyltransferase required for the 6-O-methylation of the polysaccharide backbone of 6-O- methylglucosyl lipopolysaccharides (MGLP). Belongs to the methyltransferase superfamily.
  
 0.588
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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