Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ABK72831.1Fluoroquinolone transport system permease protein; Probable antibiotic-transport integral membrane leucine and alanine and valine rich protein abc transporter. (252 aa)    
Predicted Functional Partners:
ABK75242.1
Probable antibiotic-transport integral membrane leucine and valine rich protein abc transporter.
 
 
 0.999
ABK74144.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 
 0.997
ABK71502.1
Conserved hypothetical protein.
  
     0.771
ABK72977.1
Methyltransferase, putative, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
    0.730
ABK72554.1
Conserved hypothetical protein.
  
     0.729
ABK75719.1
ABC transporter, ATP-binding subunit; Identified by match to protein family HMM PF00005.
  
 
 0.697
ABK71626.1
ABC transporter, ATP-binding protein, NodI family protein; Identified by match to protein family HMM PF00005.
  
 
 0.697
ABK73314.1
Condensation domain protein; Identified by match to protein family HMM PF00668.
  
     0.683
ABK75545.1
Conserved hypothetical protein.
  
     0.683
ABK73325.1
Probable conserved transmembrane protein.
  
     0.670
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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