Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK69620.1Identified by match to protein family HMM PF00082; Belongs to the peptidase S8 family. (442 aa)    
Predicted Functional Partners:
ABK71110.1
Conserved hypothetical protein.
 
  
 0.895
eccB3
Conserved hypothetical protein; An ATPase (By similarity). Part of the ESX-3 specialized secretion system, which is required for siderophore-mediated iron acquisition and for the secretion of EsxH and EsxG.
 
 0.856
ABK72753.1
Identified by match to protein family HMM PF01580.
 
 
 0.804
ABK73428.1
Conserved hypothetical protein.
  
 
 0.789
ABK73967.1
Probable conserved membrane protein; Identified by match to protein family HMM PF05108.
 
 0.717
ABK74158.1
Conserved hypothetical protein; Belongs to the WXG100 family.
  
  
 0.624
ABK75211.1
Conserved hypothetical protein.
  
 0.604
eccB1
Conserved hypothetical protein; An ATPase (shown for residues 72-479). Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Plays a role in DNA conjugation, in both donor and recipient strains ; Belongs to the EccB family.
 
 0.598
ABK70327.1
Conserved hypothetical protein.
 
 
 0.582
ABK72627.1
Conserved hypothetical protein; Belongs to the WXG100 family.
  
  
 0.558
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.