Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
eutBEthanolamine ammonia-lyase, large subunit; Identified by match to protein family HMM PF06751. (471 aa)    
Predicted Functional Partners:
eutC
Ethanolamine ammonia-lyase, light chain; Identified by match to protein family HMM PF05985; Belongs to the EutC family.
 
 0.999
eat
Ethanolamine permease; Identified by match to protein family HMM PF00324; match to protein family HMM TIGR00908.
 
  
 0.887
ABK74211.1
Glycerophosphoryl diester phosphodiesterase family protein; Identified by match to protein family HMM PF03009.
     
  0.739
cobM
Precorrin-4 C11-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; Belongs to the precorrin methyltransferase family.
      
 0.604
cobO
cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF02572; match to protein family HMM TIGR00708.
      
 0.574
ABK74089.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.550
ABK74854.1
Propanediol utilization protein PduA; Identified by match to protein family HMM PF00936.
 
  
 0.538
ABK69839.1
Ethanolamine utilization protein EutN; Identified by match to protein family HMM PF03319.
 
  
 0.498
cobK
Precorrin-6x reductase; Identified by match to protein family HMM PF02571; match to protein family HMM TIGR00715.
      
 0.475
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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