Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ggtGamma-glutamyltranspeptidase; Identified by match to protein family HMM PF01019. (524 aa)    
Predicted Functional Partners:
ABK70099.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
    
 0.847
ABK70243.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
    
 0.847
ABK73235.1
Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005.
  
    0.793
rplY
Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
     
 0.787
ABK69618.1
Oxidoreductase, 2OG-Fe(II) oxygenase family protein; Identified by match to protein family HMM PF03171; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.766
ABK71429.1
ABC polar amino acid transporter, inner membrane subunit; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
  
    0.761
ABK74566.1
Extracellular solute-binding protein, family protein 3; Identified by match to protein family HMM PF00497.
  
  
 0.739
ABK71104.1
Urea amidolyase; Identified by match to protein family HMM PF02626; match to protein family HMM PF02682; match to protein family HMM TIGR00724.
   
 
 0.739
pepA
Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
 
 
 0.732
ABK70858.1
Globin; Identified by match to protein family HMM PF01152.
     
 0.724
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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