Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABK72151.1Hypothetical protein; Identified by Glimmer2; putative. (301 aa)    
Predicted Functional Partners:
ABK76051.1
NADH:flavin oxidoreductase/nadh oxidase; Identified by match to protein family HMM PF00724.
       0.804
ABK75522.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05976.
  
     0.733
ABK75418.1
Carbohydrate kinase, PfkB, putative; Identified by match to protein family HMM PF00294.
  
     0.727
ABK73201.1
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.726
ABK75772.1
Conserved hypothetical protein.
  
     0.721
ABK76032.1
Conserved hypothetical protein.
  
     0.711
saeA
Hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) but not donor (mc(2)155) strain.
  
     0.704
ABK74862.1
Conserved hypothetical protein.
  
     0.691
ABK69959.1
Cutinase superfamily protein; Identified by match to protein family HMM PF01083.
  
     0.678
ABK73767.1
Conserved hypothetical protein.
  
     0.676
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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