Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABK70432.1Putative transcriptional regulator; Identified by match to protein family HMM PF00440. (205 aa)    
Predicted Functional Partners:
ABK76239.1
FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
 
   
 0.891
ABK72161.1
Conserved domain protein.
  
     0.557
ABK73570.1
Conserved hypothetical protein.
  
   
 0.543
ABK71652.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.535
ABK73802.1
Ribosomal RNA adenine dimethylase family protein; Identified by match to protein family HMM PF00398; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
     
 0.506
ABK72430.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
  
    0.484
ABK71772.1
Conserved hypothetical protein.
  
     0.484
ABK73223.1
Conserved hypothetical protein.
  
     0.461
ABK71984.1
Conserved domain protein.
  
     0.449
ABK74448.1
Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
   
 
 0.446
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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